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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pmm2Phosphomannomutase; Involved in the synthesis of the GDP-mannose and dolichol- phosphate-mannose required for a number of critical mannosyl transfer reactions. (250 aa)    
Predicted Functional Partners:
gmppb
GDP-mannose pyrophosphorylase B.
  
 
 0.965
mpi
Mannose-6-phosphate isomerase.
  
 
 0.963
LOC108412953
GDP-mannose pyrophosphorylase Aa.
  
 
 0.940
gmppa
GDP-mannose pyrophosphorylase Ab.
  
 
 0.940
pudp
Pseudouridine 5'-phosphatase.
  
 
 0.924
rfk
Riboflavin kinase.
   
 0.923
tk1
Thymidine kinase.
   
 
 0.923
yipf6
Protein YIPF.
    
 0.916
LOC108411364
Hexokinase 2.
    
 0.904
hk1
Hexokinase 1.
    
 0.904
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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