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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108437029Uncharacterized protein. (243 aa)    
Predicted Functional Partners:
lcat
Lecithin-cholesterol acyltransferase.
   
 0.771
pla2g15
Phospholipase A2, group XV.
   
 0.740
ENSPNAP00000001085
Vitellogenin domain-containing protein.
   
 0.725
LOC108411371
Apolipoprotein Bb, tandem duplicate 2.
   
 0.725
apob
Apolipoprotein Ba.
   
 0.725
ENSPNAP00000030326
Uncharacterized protein.
   
 0.720
LOC108444391
Apolipoprotein Ea.
   
 
 0.705
pltp
Phospholipid transfer protein.
     
 0.682
LOC108429949
Apolipoprotein Eb.
   
 
0.670
LOC108430068
Vitellogenin domain-containing protein.
   
 0.634
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.