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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ripor3RIPOR family member 3. (943 aa)    
Predicted Functional Partners:
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.790
LOC108411505
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.790
GRXCR2
Glutaredoxin and cysteine rich domain containing 2.
     
 0.632
gle1
GLE1 RNA export mediator.
    
 0.623
frem1
Fras1 related extracellular matrix 1a.
    
 0.571
LOC108429520
Fras1 related extracellular matrix 1b.
    
 0.571
RPS15A
Ribosomal protein S15a; Belongs to the universal ribosomal protein uS8 family.
   
 
 0.569
arl6ip1
ADP-ribosylation factor-like 6 interacting protein 1.
   
 
 0.569
grxcr1
Glutaredoxin and cysteine rich domain containing 1 a.
     
 0.562
ENSPNAP00000023394
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 
 0.562
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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