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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108437035Rho GTPase activating protein 35b. (1518 aa)    
Predicted Functional Partners:
LOC108411640
Ras homolog gene family, member Aa.
    
 0.950
LOC108444098
Uncharacterized protein.
    
 0.950
LOC108438067
Ras homolog gene family, member Ac.
    
 0.925
rhoc
Ras homolog family member Cb.
    
 0.924
LOC108427591
Ras homolog family member Ca.
    
 0.924
RHOB
Ras homolog family member B.
    
 0.921
LOC108425062
Ras homolog gene family, member Ab.
    
 0.904
SRC
Tyrosine-protein kinase.
    
 0.887
LOC108425539
Tyrosine-protein kinase.
    
 0.887
LOC108425242
RAS p21 protein activator (GTPase activating protein) 1b.
    
 0.886
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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