Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ptprgProtein tyrosine phosphatase receptor type Ga. (1407 aa)    
Predicted Functional Partners:
PTPN14
Protein tyrosine phosphatase non-receptor type 14.
    
 
 0.863
lum
Lumican.
    
 0.862
GRIN3A
Glutamate ionotropic receptor NMDA type subunit 3A.
    
 
 0.856
ENSPNAP00000035539
Uncharacterized protein.
   
 0.805
mcm7
DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...]
    
 
 0.803
ptpre
Receptor-type tyrosine-protein phosphatase.
    
 0.790
LOC108444109
Protein tyrosine phosphatase receptor type Eb.
    
 0.790
cntn2
Contactin 2.
    
 
 0.775
LOC108432562
Contactin 1b.
    
 
 0.753
CNTN1
Contactin 1.
    
 
 0.753
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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