Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC108430090Uncharacterized protein. (564 aa)    
Predicted Functional Partners:
LOC108424184
Malate synthase-like.
   
 
 0.773
LOC108437991
NBR1 autophagy cargo receptor b.
    
 0.620
LOC108413416
NBR1 autophagy cargo receptor a.
    
 0.620
LOC108423915
NME/NM23 family member 8; Belongs to the NDK family.
   
   0.602
wdr90
WD repeat domain 90.
   
 0.577
ENSPNAP00000023221
Uncharacterized protein.
    
  0.567
ENSPNAP00000023249
WDFY family member 4.
    
  0.567
mdh2
Malate dehydrogenase.
    
 0.492
mib2
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.480
ENSPNAP00000012154
Death domain-containing protein.
    
  0.419
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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