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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc35g1Solute carrier family 35 member G1. (402 aa)    
Predicted Functional Partners:
plce1
Phospholipase C, epsilon 1.
      
 0.672
slc35c1
Solute carrier family 35 member C1.
   
  
 0.659
slc35e1
Solute carrier family 35 member E1.
      
 0.634
slc35e3
Solute carrier family 35 member E3.
      
 0.611
slc35b2
Solute carrier family 35 member B2.
      
 0.547
LOC108426718
Inositol polyphosphate-5-phosphatase L.
      
 0.471
INPP5A
Inositol polyphosphate-5-phosphatase A.
      
 0.471
xpnpep3
X-prolyl aminopeptidase 3, mitochondrial.
    
 0.463
xpnpep2
X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound; Belongs to the peptidase M24B family.
    
 0.463
xpnpep1
X-prolyl aminopeptidase (aminopeptidase P) 1, soluble; Belongs to the peptidase M24B family.
    
 0.463
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.