Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC108435874Neuronal pentraxin 1 like. (443 aa)    
Predicted Functional Partners:
LOC108441214
Desumoylating isopeptidase 1a.
      
 0.691
desi1
Desumoylating isopeptidase 1b.
      
 0.532
gabra4
Gamma-aminobutyric acid (GABA) A receptor, subunit alpha 4; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
      
 0.530
LOC108442273
Gamma-aminobutyric acid (GABA) A receptor, alpha 6b; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
      
 0.530
ENSPNAP00000021909
Stum, mechanosensory transduction mediator homolog.
      
 0.439
ENSPNAP00000019925
Transducer of ERBB2, 1a.
      
 0.437
LOC108443190
Transducer of ERBB2, 1b.
      
 0.437
LOC108430687
Zgc:66475.
      
 0.434
c1ql1
Complement component 1, q subcomponent-like 3b.
      
 0.426
LOC108430160
C1q domain-containing protein.
      
 0.405
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.