close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108440851Cysteine three histidine 1. (320 aa)    
Predicted Functional Partners:
fbxo43
F-box protein 43.
   
 0.908
fbxo5
F-box protein 5.
   
 
  0.885
exosc8
Exosome component 8.
    
  0.829
ENSPNAP00000016779
5'-3' exoribonuclease 1.
    
 0.816
dcp2
Decapping mRNA 2.
   
 0.740
cnot1
CCR4-NOT transcription complex, subunit 1.
    
 
 0.667
exosc2
Exosome component 2.
    
 0.642
ENSPNAP00000017508
Decapping mRNA 1B.
    
 0.638
dcp1a
Decapping mRNA 1A.
    
 0.638
exosc5
Exosome component 5.
    
  0.638
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.