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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108442488Uncharacterized protein. (863 aa)    
Predicted Functional Partners:
pank4
Pantothenate kinase.
     
 0.889
ak9
Adenylate kinase 9.
   
 
 0.862
nudt12
Nudix (nucleoside diphosphate linked moiety X)-type motif 12.
   
 0.843
gdpd1
Glycerophosphodiester phosphodiesterase domain containing 1.
  
 
 0.835
LOC108411042
Glycerophosphodiester phosphodiesterase domain containing 3a.
  
 
 0.834
gdpd3
Glycerophosphodiester phosphodiesterase domain containing 3b.
  
 
 0.829
nt5e
5'-nucleotidase, ecto (CD73); Belongs to the 5'-nucleotidase family.
  
 
 0.814
gucy2c
Guanylate cyclase.
     
 0.811
LOC108436964
Phosphodiesterase.
     
 0.808
pde6c
Phosphodiesterase.
     
 0.808
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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