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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108431359Uncharacterized protein. (543 aa)    
Predicted Functional Partners:
csnk1a1
Casein kinase 1, alpha 1; Belongs to the protein kinase superfamily.
    
 0.655
apc
APC regulator of WNT signaling pathway.
    
 0.653
apc2
APC regulator of WNT signaling pathway 2.
    
 0.653
ENSPNAP00000018397
Regulator of G protein signaling 3b.
   
 
0.607
LOC108441052
Si:ch211-154e10.1.
   
 
0.607
ripk4
Receptor-interacting serine-threonine kinase 4.
    
 0.593
LOC108442114
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.
    
 0.589
LOC108424115
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.
    
 0.589
LOC108415871
Uncharacterized protein.
    
 0.589
LOC108433748
Glycogen synthase kinase 3 alpha a; Belongs to the protein kinase superfamily.
    
 0.588
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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