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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc35f6Solute carrier family 35 member F6; May play a role as a nucleotide-sugar transporter. (376 aa)    
Predicted Functional Partners:
nus1
NUS1 dehydrodolichyl diphosphate synthase subunit.
    
 0.684
slc35b2
Solute carrier family 35 member B2.
      
 0.641
faf2
Fas associated factor family member 2.
   
  
 0.633
rars2
Arginyl-tRNA synthetase 2, mitochondrial (putative); Belongs to the class-I aminoacyl-tRNA synthetase family.
     
 0.601
slc35b4
Solute carrier family 35 member B4.
      
 0.597
slc35c1
Solute carrier family 35 member C1.
   
  
 0.579
otud4
Uncharacterized protein.
   
  
 0.566
nudt6
Nudix (nucleoside diphosphate linked moiety X)-type motif 6.
      
 0.514
LOC108431982
Si:ch211-141o9.10.
  
  
 0.486
slc35e1
Solute carrier family 35 member E1.
      
 0.479
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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