close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
apbb3Amyloid beta (A4) precursor protein-binding, family B, member 3. (480 aa)    
Predicted Functional Partners:
APP
Amyloid beta precursor protein.
    
 0.851
LOC108426075
Amyloid beta (A4) precursor protein b.
    
 0.851
aplp2
Amyloid beta (A4) precursor-like protein 2.
    
 0.781
LOC108440469
Amyloid beta (A4) precursor-like protein 1.
    
 0.748
mre11
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
   
  0.684
rad50
RAD50 homolog, double strand break repair protein.
   
 0.644
nbn
Nibrin.
    
  0.640
ankrd6
Ankyrin repeat domain 6b.
    
 0.627
atm
Non-specific serine/threonine protein kinase.
    
 0.624
cd44
CD44 molecule (Indian blood group) b.
     
 0.615
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.