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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ube2j1Ubiquitin-conjugating enzyme E2, J1. (326 aa)    
Predicted Functional Partners:
LOC108425074
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.997
LOC108424613
Ubiquitin-conjugating enzyme E2 variant 1.
    
 0.997
ube2g2
Ubiquitin-conjugating enzyme E2G 2 (UBC7 homolog, yeast); Belongs to the ubiquitin-conjugating enzyme family.
   
0.951
sel1l
SEL1L adaptor subunit of ERAD E3 ubiquitin ligase.
    
 
 0.886
ube2h
Ubiquitin-conjugating enzyme E2H (UBC8 homolog, yeast); Belongs to the ubiquitin-conjugating enzyme family.
   
 0.886
trip12
Thyroid hormone receptor interactor 12.
    
 0.880
ube2v2
Ubiquitin-conjugating enzyme E2 variant 2.
    
 0.875
LOC108411519
Ubiquitin-conjugating enzyme E2, J2 (UBC6 homolog, yeast).
    
0.872
UBE2J2
Ubiquitin conjugating enzyme E2 J2.
    
0.872
fancm
Uncharacterized protein.
    
 0.858
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.