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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pole2DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. (529 aa)    
Predicted Functional Partners:
pole
DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.
   
 0.999
pole4
Polymerase (DNA-directed), epsilon 4, accessory subunit.
    
 0.999
pole3
Polymerase (DNA directed), epsilon 3 (p17 subunit).
    
 0.999
cdc45
CDC45 cell division cycle 45 homolog (S. cerevisiae).
   
 0.998
mcm2
DNA helicase; Belongs to the MCM family.
   
 0.998
mcm4
DNA helicase; Belongs to the MCM family.
   
 0.998
wdhd1
WD repeat and HMG-box DNA binding protein 1.
   
 
 0.996
mcm5
DNA helicase; Belongs to the MCM family.
   
 0.996
pola1
DNA polymerase.
   
 0.995
mcm9
Minichromosome maintenance 9 homologous recombination repair factor; Belongs to the MCM family.
   
 0.992
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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