ENSPNAP00000009474 protein (Pygocentrus nattereri)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSPNAP00000009474

Uncharacterized protein. (284 aa)

Predicted Functional Partners:

LOC108411615

0.927

ENSPNAP00000018172

0.849

LOC108437767

0.849

LOC108432941

0.794

tnf

0.781

ENSPNAP00000004243

0.760

tnfsf11

0.760

LOC108423724

0.744

traf2

0.744

ENSPNAP00000012490

0.618

Your Current Organism:

Pygocentrus nattereri

NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPNAP00000004243	ENSPNAP00000009474	ENSPNAP00000004243	ENSPNAP00000009474	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.	Uncharacterized protein.	0.760
ENSPNAP00000004243	ENSPNAP00000012490	ENSPNAP00000004243	ENSPNAP00000012490	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.	0.645
ENSPNAP00000004243	LOC108411615	ENSPNAP00000004243	ENSPNAP00000015885	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.	0.637
ENSPNAP00000004243	LOC108423724	ENSPNAP00000004243	ENSPNAP00000014931	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.578
ENSPNAP00000004243	LOC108432941	ENSPNAP00000004243	ENSPNAP00000032062	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.	CD40 ligand; Belongs to the tumor necrosis factor family.	0.627
ENSPNAP00000004243	traf2	ENSPNAP00000004243	ENSPNAP00000020535	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.578
ENSPNAP00000009474	ENSPNAP00000004243	ENSPNAP00000009474	ENSPNAP00000004243	Uncharacterized protein.	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.	0.760
ENSPNAP00000009474	ENSPNAP00000012490	ENSPNAP00000009474	ENSPNAP00000012490	Uncharacterized protein.	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.	0.618
ENSPNAP00000009474	ENSPNAP00000018172	ENSPNAP00000009474	ENSPNAP00000018172	Uncharacterized protein.	Ig-like domain-containing protein.	0.849
ENSPNAP00000009474	LOC108411615	ENSPNAP00000009474	ENSPNAP00000015885	Uncharacterized protein.	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.	0.927
ENSPNAP00000009474	LOC108423724	ENSPNAP00000009474	ENSPNAP00000014931	Uncharacterized protein.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.744
ENSPNAP00000009474	LOC108432941	ENSPNAP00000009474	ENSPNAP00000032062	Uncharacterized protein.	CD40 ligand; Belongs to the tumor necrosis factor family.	0.794
ENSPNAP00000009474	LOC108437767	ENSPNAP00000009474	ENSPNAP00000034906	Uncharacterized protein.	Ig-like domain-containing protein.	0.849
ENSPNAP00000009474	tnf	ENSPNAP00000009474	ENSPNAP00000036429	Uncharacterized protein.	Tumor necrosis factor a (TNF superfamily, member 2).	0.781
ENSPNAP00000009474	tnfsf11	ENSPNAP00000009474	ENSPNAP00000011672	Uncharacterized protein.	TNF superfamily member 11; Belongs to the tumor necrosis factor family.	0.760
ENSPNAP00000009474	traf2	ENSPNAP00000009474	ENSPNAP00000020535	Uncharacterized protein.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.744
ENSPNAP00000012490	ENSPNAP00000004243	ENSPNAP00000012490	ENSPNAP00000004243	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.	0.645
ENSPNAP00000012490	ENSPNAP00000009474	ENSPNAP00000012490	ENSPNAP00000009474	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.	Uncharacterized protein.	0.618
ENSPNAP00000012490	LOC108411615	ENSPNAP00000012490	ENSPNAP00000015885	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.	0.607
ENSPNAP00000012490	LOC108423724	ENSPNAP00000012490	ENSPNAP00000014931	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.910