STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPNAP00000010573Zinc finger protein 106a. (1000 aa)    
Predicted Functional Partners:
mybbp1a
MYB binding protein (P160) 1a.
   
    0.795
usp14
Ubiquitin carboxyl-terminal hydrolase.
   
    0.789
LOC108429417
Heat shock protein 4a.
   
   0.617
LOC108430974
Heat shock protein 4b.
   
   0.617
zdhhc22
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
    
 0.578
LOC108440697
CREB binding protein a.
    
  0.529
LOC108412904
Uncharacterized protein.
    
  0.525
adarb2
Adenosine deaminase RNA specific B2 (inactive).
      
 0.516
ENSPNAP00000007474
Purine-rich element binding protein Aa.
      
 0.513
coq6
Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial; FAD-dependent monooxygenase required for the C5-ring hydroxylation during ubiquinone biosynthesis. Catalyzes the hydroxylation of 3-polyprenyl-4-hydroxybenzoic acid to 3-polyprenyl- 4,5-dihydroxybenzoic acid. The electrons required for the hydroxylation reaction may be funneled indirectly from NADPH via a ferredoxin/ferredoxin reductase system to COQ6.
      
 0.507
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.