STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBOF1Si:ch211-243o19.4. (521 aa)    
Predicted Functional Partners:
LOC108424184
Malate synthase-like.
   
 
 0.884
ccdc78
Coiled-coil domain containing 78.
    
 
 0.686
LOC108439405
Collagen beta(1-O)galactosyltransferase 2.
      
 0.510
ENSPNAP00000004191
G protein-coupled receptor 160.
      
 0.472
mdh2
Malate dehydrogenase.
     
 0.422
LOC108425197
Serine/threonine-protein kinase PLK.
    
 0.421
plk2
Serine/threonine-protein kinase PLK.
    
 0.421
plk4
Polo-like kinase 4 (Drosophila).
    
 0.421
plk3
Serine/threonine-protein kinase PLK.
    
 0.421
plk1
Serine/threonine-protein kinase PLK.
    
 0.421
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.