STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108428067Fibrinogen C domain containing 1. (464 aa)    
Predicted Functional Partners:
kansl2
KAT8 regulatory NSL complex subunit 2.
    
 0.526
colec10
Collectin subfamily member 10.
    
 0.515
colec11
Collectin sub-family member 11.
    
 0.515
LOC108430032
Si:ch211-113j14.1; Belongs to the cytochrome P450 family.
      
 0.463
itgb8
Integrin beta; Belongs to the integrin beta chain family.
    
  0.462
ptx3
Pentraxin 3, long a.
    
 
 0.458
LOC108411192
Pentraxin 3, long b.
    
 
 0.458
mcrs1
Microspherule protein 1.
    
 0.447
kansl3
KAT8 regulatory NSL complex subunit 3.
    
 0.409
tex30
Testis expressed 30.
    
 0.409
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.