STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108437900Uncharacterized protein. (885 aa)    
Predicted Functional Partners:
LOC108427579
Membrane associated guanylate kinase, WW and PDZ domain containing 3b.
    
  0.814
LOC108412149
MAGI family member, X-linked b.
    
  0.814
magi3
Wu:fi36a10.
    
  0.814
LOC108426801
Vinculin a.
   
 0.807
LOC108443317
Vinculin b.
   
 0.807
LOC108433055
Myosin, light chain 1, alkali; skeletal, fast.
   
 0.765
LOC108433460
Uncharacterized protein.
   
 0.765
myoz1
Myozenin 1a.
   
 
 0.725
capzb
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
    
 0.712
LOC108412427
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
   
  0.703
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.