STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108419366Troponin I4b, tandem duplicate 1. (177 aa)    
Predicted Functional Partners:
LOC108425385
Troponin T2e, cardiac.
  
 0.885
ENSPNAP00000014177
Troponin T2d, cardiac.
  
 0.881
LOC108434459
Uncharacterized protein.
  
 0.881
LOC108434838
Si:rp71-17i16.4.
   
 0.859
ENSPNAP00000030602
Troponin C type 2 (fast).
   
 0.859
LOC108441587
Troponin T type 2b (cardiac).
   
 0.853
ENSPNAP00000002092
Troponin T2c, cardiac.
   
 0.852
LOC108429193
Uncharacterized protein.
   
 0.852
LOC108427325
Troponin T type 1 (skeletal, slow).
   
 0.852
LOC108428830
Troponin T type 3a (skeletal, fast).
   
 0.852
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.