STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
id4Inhibitor of DNA binding 4. (115 aa)    
Predicted Functional Partners:
id3
Inhibitor of DNA binding 3.
  
0.913
id1
BHLH domain-containing protein.
  
  
0.846
LOC108435115
Inhibitor of DNA binding 1, HLH protein.
  
  
0.844
LOC108411006
Inhibitor of DNA binding 2b.
  
 
 
0.844
id2
Inhibitor of DNA binding 2a.
  
  
 
0.840
olig1
Oligodendrocyte transcription factor 1.
    
 
 0.653
olig2
Oligodendrocyte lineage transcription factor 2.
    
 
 0.638
TCF4
Transcription factor 4.
    
 
 0.633
LOC108430108
Transcription factor 3b.
    
 
 0.633
LOC108428361
BHLH domain-containing protein.
    
 
 0.633
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.