STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arhgef28Rho guanine nucleotide exchange factor (GEF) 28a. (1845 aa)    
Predicted Functional Partners:
RHOB
Ras homolog family member B.
   
 0.694
LOC108444098
Uncharacterized protein.
   
 0.694
rhoc
Ras homolog family member Cb.
   
 0.693
LOC108425062
Ras homolog gene family, member Ab.
   
 0.693
LOC108427591
Ras homolog family member Ca.
   
 0.693
LOC108438067
Ras homolog gene family, member Ac.
   
 0.693
LOC108411640
Ras homolog gene family, member Aa.
   
 0.693
LOC108424117
Macrophage stimulating 1 receptor a.
    
  0.640
ENSPNAP00000006549
Uncharacterized protein.
    
  0.640
met
MET proto-oncogene, receptor tyrosine kinase.
    
  0.640
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.