ENSPNAP00000016444 protein (Pygocentrus nattereri)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSPNAP00000016444

Uncharacterized protein. (532 aa)

Predicted Functional Partners:

fech

0.666

catip

0.633

slc30a9

0.629

LOC108411896

0.602

LOC108430976

0.602

ndfip1

0.602

ccs

0.573

sod2

0.567

mocs1

0.559

abcf3

0.514

Your Current Organism:

Pygocentrus nattereri

NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPNAP00000016444	LOC108411896	ENSPNAP00000016444	ENSPNAP00000007256	Uncharacterized protein.	Nedd4 family interacting protein 2.	0.602
ENSPNAP00000016444	LOC108430976	ENSPNAP00000016444	ENSPNAP00000025506	Uncharacterized protein.	Nedd4 family interacting protein 1.	0.602
ENSPNAP00000016444	abcf3	ENSPNAP00000016444	ENSPNAP00000012520	Uncharacterized protein.	ATP-binding cassette, sub-family F (GCN20), member 3.	0.514
ENSPNAP00000016444	catip	ENSPNAP00000016444	ENSPNAP00000002237	Uncharacterized protein.	Ciliogenesis associated TTC17 interacting protein.	0.633
ENSPNAP00000016444	ccs	ENSPNAP00000016444	ENSPNAP00000026566	Uncharacterized protein.	Copper chaperone for superoxide dismutase.	0.573
ENSPNAP00000016444	fech	ENSPNAP00000016444	ENSPNAP00000025356	Uncharacterized protein.	Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.	0.666
ENSPNAP00000016444	mocs1	ENSPNAP00000016444	ENSPNAP00000005233	Uncharacterized protein.	Molybdenum cofactor synthesis 1.	0.559
ENSPNAP00000016444	ndfip1	ENSPNAP00000016444	ENSPNAP00000036055	Uncharacterized protein.	Nedd4 family interacting protein 1, like.	0.602
ENSPNAP00000016444	slc30a9	ENSPNAP00000016444	ENSPNAP00000033812	Uncharacterized protein.	Solute carrier family 30 member 9.	0.629
ENSPNAP00000016444	sod2	ENSPNAP00000016444	ENSPNAP00000033147	Uncharacterized protein.	Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.	0.567
LOC108411896	ENSPNAP00000016444	ENSPNAP00000007256	ENSPNAP00000016444	Nedd4 family interacting protein 2.	Uncharacterized protein.	0.602
LOC108430976	ENSPNAP00000016444	ENSPNAP00000025506	ENSPNAP00000016444	Nedd4 family interacting protein 1.	Uncharacterized protein.	0.602
abcf3	ENSPNAP00000016444	ENSPNAP00000012520	ENSPNAP00000016444	ATP-binding cassette, sub-family F (GCN20), member 3.	Uncharacterized protein.	0.514
catip	ENSPNAP00000016444	ENSPNAP00000002237	ENSPNAP00000016444	Ciliogenesis associated TTC17 interacting protein.	Uncharacterized protein.	0.633
ccs	ENSPNAP00000016444	ENSPNAP00000026566	ENSPNAP00000016444	Copper chaperone for superoxide dismutase.	Uncharacterized protein.	0.573
ccs	slc30a9	ENSPNAP00000026566	ENSPNAP00000033812	Copper chaperone for superoxide dismutase.	Solute carrier family 30 member 9.	0.707
ccs	sod2	ENSPNAP00000026566	ENSPNAP00000033147	Copper chaperone for superoxide dismutase.	Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.	0.956
fech	ENSPNAP00000016444	ENSPNAP00000025356	ENSPNAP00000016444	Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.	Uncharacterized protein.	0.666
fech	mocs1	ENSPNAP00000025356	ENSPNAP00000005233	Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.	Molybdenum cofactor synthesis 1.	0.865
fech	sod2	ENSPNAP00000025356	ENSPNAP00000033147	Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.	Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.	0.674