STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ranGTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (216 aa)    
Predicted Functional Partners:
xpot
Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family.
   
 0.989
LOC108440489
RAN binding protein 2.
   
 0.989
xpo5
Exportin 5.
    
 0.988
RANBP1
RAN binding protein 1.
   
 0.982
xpo1
Exportin 1 (CRM1 homolog, yeast) a.
   
 0.973
LOC108438731
Exportin 1 (CRM1 homolog, yeast) b.
   
 0.973
kpnb1
Karyopherin (importin) beta 1.
   
 0.970
rcc1
Regulator of chromosome condensation 1.
   
 0.962
rangap1
RAN GTPase activating protein 1a.
   
 0.947
LOC108413509
Ran GTPase activating protein 1b.
   
 0.947
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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