STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plekhj1Pleckstrin homology domain containing, family J member 1. (156 aa)    
Predicted Functional Partners:
fancm
Uncharacterized protein.
    
 0.846
camkmt
Calmodulin-lysine N-methyltransferase.
     
 0.625
fanca
Fanconi_A_N domain-containing protein.
    
 0.584
h6pd
Hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase).
     
 0.571
ENSPNAP00000024708
Si:dkey-220o5.5.
    
 
 0.570
LOC108428616
Myc target 1b.
      
 0.562
znf574
Zinc finger protein 526.
    
 0.562
LOC108428438
Golgi glycoprotein 1a.
      
 0.543
prepl
Prolyl endopeptidase like.
      
 0.536
gpatch1
G patch domain containing 1.
      
 0.525
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.