STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
angptl7Angiopoietin-like 7. (338 aa)    
Predicted Functional Partners:
tie1
Tyrosine kinase with immunoglobulin-like and EGF-like domains 1.
   
 0.843
tek
TEK tyrosine kinase, endothelial.
   
 0.843
pdgfrb
Platelet-derived growth factor receptor, beta polypeptide; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.
    
 0.723
ngfr
Nerve growth factor receptor a (TNFR superfamily, member 16).
     
 0.638
itgbl1
Integrin, beta-like 1.
    
 0.549
LOC108425840
Si:ch211-167j9.5.
    
  0.538
LOC108413356
Protein kinase domain-containing protein.
    
  0.538
kansl2
KAT8 regulatory NSL complex subunit 2.
    
 0.526
dpysl5
Dihydropyrimidinase like 5a.
      
 0.519
LOC108439811
Ig-like domain-containing protein.
    
 0.504
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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