Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC108410694 | LOC108413858 | ENSPNAP00000010179 | ENSPNAP00000035377 | MADS-box domain-containing protein. | Nuclear factor of activated T cells 4. | 0.829 |
LOC108410694 | LOC108430942 | ENSPNAP00000010179 | ENSPNAP00000003795 | MADS-box domain-containing protein. | NK2 homeobox 5. | 0.573 |
LOC108410694 | gata5 | ENSPNAP00000010179 | ENSPNAP00000024584 | MADS-box domain-containing protein. | GATA binding protein 5. | 0.766 |
LOC108410694 | lmo2 | ENSPNAP00000010179 | ENSPNAP00000013554 | MADS-box domain-containing protein. | LIM domain only 2 (rhombotin-like 1). | 0.456 |
LOC108410694 | nfatc2 | ENSPNAP00000010179 | ENSPNAP00000032887 | MADS-box domain-containing protein. | Nuclear factor of activated T cells 2a. | 0.830 |
LOC108413858 | LOC108410694 | ENSPNAP00000035377 | ENSPNAP00000010179 | Nuclear factor of activated T cells 4. | MADS-box domain-containing protein. | 0.829 |
LOC108413858 | gata5 | ENSPNAP00000035377 | ENSPNAP00000024584 | Nuclear factor of activated T cells 4. | GATA binding protein 5. | 0.808 |
LOC108413858 | nfatc2 | ENSPNAP00000035377 | ENSPNAP00000032887 | Nuclear factor of activated T cells 4. | Nuclear factor of activated T cells 2a. | 0.887 |
LOC108413858 | sqstm1 | ENSPNAP00000035377 | ENSPNAP00000031921 | Nuclear factor of activated T cells 4. | Sequestosome 1. | 0.650 |
LOC108413858 | srf | ENSPNAP00000035377 | ENSPNAP00000027328 | Nuclear factor of activated T cells 4. | Serum response factor b. | 0.829 |
LOC108430942 | LOC108410694 | ENSPNAP00000003795 | ENSPNAP00000010179 | NK2 homeobox 5. | MADS-box domain-containing protein. | 0.573 |
LOC108430942 | gata5 | ENSPNAP00000003795 | ENSPNAP00000024584 | NK2 homeobox 5. | GATA binding protein 5. | 0.909 |
LOC108430942 | srf | ENSPNAP00000003795 | ENSPNAP00000027328 | NK2 homeobox 5. | Serum response factor b. | 0.573 |
LOC108430942 | zfpm2 | ENSPNAP00000003795 | ENSPNAP00000004115 | NK2 homeobox 5. | Zinc finger protein, FOG family member 2a. | 0.412 |
gata5 | LOC108410694 | ENSPNAP00000024584 | ENSPNAP00000010179 | GATA binding protein 5. | MADS-box domain-containing protein. | 0.766 |
gata5 | LOC108413858 | ENSPNAP00000024584 | ENSPNAP00000035377 | GATA binding protein 5. | Nuclear factor of activated T cells 4. | 0.808 |
gata5 | LOC108430942 | ENSPNAP00000024584 | ENSPNAP00000003795 | GATA binding protein 5. | NK2 homeobox 5. | 0.909 |
gata5 | lmo2 | ENSPNAP00000024584 | ENSPNAP00000013554 | GATA binding protein 5. | LIM domain only 2 (rhombotin-like 1). | 0.793 |
gata5 | nfatc2 | ENSPNAP00000024584 | ENSPNAP00000032887 | GATA binding protein 5. | Nuclear factor of activated T cells 2a. | 0.808 |
gata5 | sqstm1 | ENSPNAP00000024584 | ENSPNAP00000031921 | GATA binding protein 5. | Sequestosome 1. | 0.795 |
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