STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
papolaPoly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (703 aa)    
Predicted Functional Partners:
sympk
Symplekin.
    
 0.983
cpsf2
Cleavage and polyadenylation specificity factor subunit 2.
    
 0.981
cpsf1
Cleavage and polyadenylation specific factor 1.
    
 0.981
cpsf4
Cleavage and polyadenylation specific factor 4.
    
 0.981
WDR33
WD repeat domain 33.
   
 0.980
cstf2
Cleavage stimulation factor, 3' pre-RNA, subunit 2.
    
 0.976
cstf3
Cleavage stimulation factor, 3' pre-RNA, subunit 3.
    
 0.976
wdr77
WD_REPEATS_REGION domain-containing protein.
    
 0.959
LOC108430427
Fip1 domain-containing protein.
   
 0.941
fip1l1
FIP1 like 1a (S. cerevisiae).
   
 0.941
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.