STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ttll4Tubulin tyrosine ligase-like family, member 4. (1148 aa)    
Predicted Functional Partners:
agbl4
ATP/GTP binding protein-like 4.
    
 
 0.731
ttll12
Tubulin tyrosine ligase-like family, member 12.
      
0.645
ttll5
Tubulin tyrosine ligase-like family, member 5.
      
0.637
ttl
Tubulin tyrosine ligase.
   
  
0.594
agtpbp1
ATP/GTP binding protein 1.
    
 
 0.552
LOC108438530
ATP/GTP binding protein-like 1.
    
 
 0.552
LOC108436924
ATP/GTP binding protein-like 2.
    
 
 0.544
usp38
Ubiquitin specific peptidase 38; Belongs to the peptidase C19 family.
      
 0.527
atat1
Alpha-tubulin N-acetyltransferase 1; Specifically acetylates 'Lys-40' in alpha-tubulin on the lumenal side of microtubules. Promotes microtubule destabilization and accelerates microtubule dynamics; this activity may be independent of acetylation activity. Acetylates alpha-tubulin with a slow enzymatic rate, due to a catalytic site that is not optimized for acetyl transfer. Enters the microtubule through each end and diffuses quickly throughout the lumen of microtubules. Acetylates only long/old microtubules because of its slow acetylation rate since it does not have time to act on dyn [...]
      
 0.522
igdcc4
Immunoglobulin superfamily, DCC subclass, member 4.
      
 0.511
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.