STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108436365SRSF protein kinase 1b. (669 aa)    
Predicted Functional Partners:
LOC108411053
Serine and arginine rich splicing factor 5a.
    
 0.955
srsf9
Serine and arginine rich splicing factor 9.
    
 0.948
srsf5
Serine and arginine rich splicing factor 5b.
    
 0.946
LOC108442882
Serine and arginine rich splicing factor 4.
    
 0.946
LOC108415197
Serine and arginine rich splicing factor 1a.
    
 0.945
LOC108430244
Serine and arginine rich splicing factor 2a.
    
 0.938
LOC108431323
Serine and arginine rich splicing factor 1b.
    
 0.934
ENSPNAP00000016959
Serine and arginine rich splicing factor 6a.
    
 0.917
ENSPNAP00000034100
Serine and arginine rich splicing factor 6a.
    
 0.917
LOC108414043
Uncharacterized protein.
    
 0.895
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.