STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
usp37Ubiquitin carboxyl-terminal hydrolase. (940 aa)    
Predicted Functional Partners:
stam
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 1.
    
 0.827
stam2
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2.
    
 0.827
rps27a
Ribosomal protein S27a.
    
 0.823
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.728
LOC108422653
Ubiquitin.
    
 0.728
psmc5
Proteasome 26S subunit, ATPase 5; Belongs to the AAA ATPase family.
    
 0.721
LOC108443198
Androgen receptor.
    
 0.711
LOC108436713
Uncharacterized protein.
    
 0.711
prkn
RBR-type E3 ubiquitin transferase.
     
 0.707
zfyve1
Zinc finger, FYVE domain containing 1.
    
 0.684
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.