STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPNAP00000028865Sema domain-containing protein. (416 aa)    
Predicted Functional Partners:
nrp1
Neuropilin; Belongs to the neuropilin family.
    
 0.814
LOC108441920
Si:ch211-113g11.6; Belongs to the semaphorin family.
    
 0.719
LOC108433656
Semaphorin 7A; Belongs to the semaphorin family.
    
 0.719
LOC108439023
Uncharacterized protein; Belongs to the semaphorin family.
    
 0.719
sema3e
Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E; Belongs to the semaphorin family.
    
 0.678
sema3g
Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3bl; Belongs to the semaphorin family.
    
 0.677
LOC108436565
Sema domain-containing protein; Belongs to the semaphorin family.
    
 0.653
sema4b
Sema domain-containing protein; Belongs to the semaphorin family.
    
 0.653
LOC108442975
Sema domain-containing protein; Belongs to the semaphorin family.
    
 0.653
ENSPNAP00000003370
Uncharacterized protein.
    
 0.634
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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