STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108442984Si:dkey-202e17.1. (329 aa)    
Predicted Functional Partners:
nelfb
Negative elongation factor complex member B.
   
 0.919
nelfcd
Negative elongation factor complex member C/D.
    
 0.915
nelfe
Negative elongation factor complex member E.
   
 0.908
ST3GAL1-5
Uncharacterized protein; Belongs to the glycosyltransferase 29 family.
    
 0.903
galnt7
Polypeptide N-acetylgalactosaminyltransferase.
     
 0.896
LOC108424670
ST3 beta-galactoside alpha-2,3-sialyltransferase 8; Belongs to the glycosyltransferase 29 family.
    
 0.895
st3gal2
ST3 beta-galactoside alpha-2,3-sialyltransferase 2; Belongs to the glycosyltransferase 29 family.
    
 0.895
LOC108425758
Polypeptide N-acetylgalactosaminyltransferase.
   
 
 0.893
galnt2
Polypeptide N-acetylgalactosaminyltransferase.
     
 0.893
c1galt1c1
C1GALT1-specific chaperone 1.
    
0.891
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.