STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sfxn5Sidoreflexin. (326 aa)    
Predicted Functional Partners:
rab11fip2
RAB11 family interacting protein 2 (class I).
 
  
 0.691
rab11a
RAB11a, member RAS oncogene family.
    
 0.682
rab25
RAB11a, member RAS oncogene family, like.
    
 0.682
LOC108429533
RAB11B, member RAS oncogene family, a.
    
 0.682
LOC108427173
Uncharacterized protein.
    
 0.682
ENSPNAP00000011806
FIP-RBD domain-containing protein.
    
 0.589
LOC108426714
Uncharacterized protein.
    
 0.589
LOC108433873
RAB25, member RAS oncogene family b.
    
 0.575
LOC108442629
RAB25, member RAS oncogene family a.
    
 0.575
cnpy3
Canopy FGF signaling regulator 3.
      
 0.563
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.