STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108428960Cyclic nucleotide gated channel beta 3, tandem duplicate 1. (743 aa)    
Predicted Functional Partners:
LOC108434387
Cyclic nucleotide gated channel subunit alpha 1a.
  
0.838
LOC108443773
Cyclic nucleotide gated channel alpha 2b.
  
0.834
cnga4
Cyclic nucleotide gated channel subunit alpha 4.
  
0.834
LOC108441138
Cyclic nucleotide gated channel subunit alpha 3a.
  
0.834
cnga2
Cyclic nucleotide gated channel alpha 2a.
  
0.834
ENSPNAP00000019249
Cyclic nucleotide gated channel subunit alpha 3b.
  
0.833
cnga1
Cyclic nucleotide gated channel subunit alpha 1b.
  
0.831
CALML6
Calmodulin like 6.
   
 0.782
guca1a
Guanylate cyclase activator 1A.
    
 0.655
guca1b
Guanylate cyclase activator 1B.
   
 0.652
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.