STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pagr1PAXIP1 associated glutamate-rich protein 1. (269 aa)    
Predicted Functional Partners:
kdm6a
Lysine (K)-specific demethylase 6A.
    
 0.903
LOC108436446
Lysine (K)-specific demethylase 6A, like.
    
 0.903
rbbp5
Retinoblastoma binding protein 5.
    
 0.897
ncoa6
Nuclear receptor coactivator 6.
    
 0.895
paxip1
PAX interacting (with transcription-activation domain) protein 1.
    
 0.891
mdc1
Uncharacterized protein.
    
 0.891
ash2l
Ash2 like, histone lysine methyltransferase complex subunit.
    
 0.880
LOC108442096
Lysine (K)-specific demethylase 6B, b.
    
 0.862
kdm6b
Lysine (K)-specific demethylase 6B, a.
    
 0.862
LOC108438310
Si:dkey-217f16.6.
    
 0.859
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.