STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108435516Protein disulfide-isomerase. (494 aa)    
Predicted Functional Partners:
LOC108425050
Calreticulin.
   
 0.964
LOC108427098
Calreticulin 3b.
   
 0.959
hspa5
Heat shock protein 5; Belongs to the heat shock protein 70 family.
  
 0.958
tapbp
TAP binding protein (tapasin), tandem duplicate 1.
    
 0.955
suox
Sulfite oxidase.
   
 0.943
calr3
Calreticulin.
   
 0.943
LOC108410504
Transporter associated with antigen processing, subunit type t, teleost specific.
   
  0.898
tap1
Transporter 1, ATP-binding cassette, sub-family B (MDR/TAP).
   
  0.892
pdia3
Protein disulfide-isomerase.
  
  
 
0.883
LOC108436541
Protein disulfide-isomerase.
  
  
 
0.882
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.