Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DNF11_0158 | DNF11_3301 | A0A3G2S1U3 | A0A3G2S7Z5 | Uncharacterized protein. | Putative small nuclear ribonucleoprotein F. | 0.412 |
DNF11_0158 | MUS81 | A0A3G2S1U3 | A0A3G2S5N2 | Uncharacterized protein. | Crossover junction endonuclease MUS81. | 0.459 |
DNF11_0158 | POLD2 | A0A3G2S1U3 | A0A3G2S5I7 | Uncharacterized protein. | DNA polymerase delta small subunit. | 0.513 |
DNF11_0158 | pol3 | A0A3G2S1U3 | A0A3G2SBK0 | Uncharacterized protein. | DNA polymerase. | 0.483 |
DNF11_0158 | smd1 | A0A3G2S1U3 | A0A3G2SCJ1 | Uncharacterized protein. | Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. | 0.428 |
DNF11_0158 | smd2 | A0A3G2S1U3 | A0A3G2S7M6 | Uncharacterized protein. | Small nuclear ribonucleoprotein Sm D2. | 0.409 |
DNF11_0158 | snrpe | A0A3G2S1U3 | A0A3G2S5H6 | Uncharacterized protein. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.433 |
DNF11_3301 | DNF11_0158 | A0A3G2S7Z5 | A0A3G2S1U3 | Putative small nuclear ribonucleoprotein F. | Uncharacterized protein. | 0.412 |
DNF11_3301 | smd1 | A0A3G2S7Z5 | A0A3G2SCJ1 | Putative small nuclear ribonucleoprotein F. | Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. | 0.999 |
DNF11_3301 | smd2 | A0A3G2S7Z5 | A0A3G2S7M6 | Putative small nuclear ribonucleoprotein F. | Small nuclear ribonucleoprotein Sm D2. | 0.999 |
DNF11_3301 | snrpe | A0A3G2S7Z5 | A0A3G2S5H6 | Putative small nuclear ribonucleoprotein F. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.999 |
MUS81 | DNF11_0158 | A0A3G2S5N2 | A0A3G2S1U3 | Crossover junction endonuclease MUS81. | Uncharacterized protein. | 0.459 |
MUS81 | pol3 | A0A3G2S5N2 | A0A3G2SBK0 | Crossover junction endonuclease MUS81. | DNA polymerase. | 0.571 |
POLD2 | DNF11_0158 | A0A3G2S5I7 | A0A3G2S1U3 | DNA polymerase delta small subunit. | Uncharacterized protein. | 0.513 |
POLD2 | pol3 | A0A3G2S5I7 | A0A3G2SBK0 | DNA polymerase delta small subunit. | DNA polymerase. | 0.999 |
pol3 | DNF11_0158 | A0A3G2SBK0 | A0A3G2S1U3 | DNA polymerase. | Uncharacterized protein. | 0.483 |
pol3 | MUS81 | A0A3G2SBK0 | A0A3G2S5N2 | DNA polymerase. | Crossover junction endonuclease MUS81. | 0.571 |
pol3 | POLD2 | A0A3G2SBK0 | A0A3G2S5I7 | DNA polymerase. | DNA polymerase delta small subunit. | 0.999 |
smd1 | DNF11_0158 | A0A3G2SCJ1 | A0A3G2S1U3 | Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. | Uncharacterized protein. | 0.428 |
smd1 | DNF11_3301 | A0A3G2SCJ1 | A0A3G2S7Z5 | Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. | Putative small nuclear ribonucleoprotein F. | 0.999 |
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