STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ups1Uroporphyrinogen-III synthase. (403 aa)    
Predicted Functional Partners:
HEM3
Porphobilinogen deaminase.
  
 0.996
hem12
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
  
 
 0.988
ALAD
Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
  
 0.973
DNF11_3374
Uncharacterized protein.
  
 0.951
met8
Sirohydrochlorin ferrochelatase.
  
 
 0.894
fech
Ferrochelatase, mitochondrial; Belongs to the ferrochelatase family.
  
  
 0.681
hem14
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
  
  
 0.674
Coprox
Coproporphyrinogen-III oxidase.
     
 0.649
sir1
Sulfite reductase [NADPH] subunit beta.
    
 0.612
DNF11_2331
Chorismate synthase.
      
 0.598
Your Current Organism:
Malassezia restricta
NCBI taxonomy Id: 425264
Other names: M. restricta CBS 7877, Malassezia restricta CBS 7877
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