STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TFB3RNA polymerase II transcription factor B subunit3. (122 aa)    
Predicted Functional Partners:
CCNH
Cyclin-H; Belongs to the cyclin family.
   
 0.999
rad15
DNA repair helicase rad15.
    
 0.999
crk1
Serine/threonine-protein kinase crk1; Belongs to the protein kinase superfamily.
   
 0.999
tfh47
TFIIH basal transcription factor complex p47 subunit.
   
 0.998
tfb4
RNA polymerase II transcription factor B subunit4.
    
 0.998
tfb2
RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
    
 0.998
ercc3
Putative DNA repair helicase ercc3.
    
 0.998
tfa1
Transcription initiation factor IIE subunit alpha.
    
 0.997
tfa2
Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.
   
 0.997
tfb1
RNA polymerase II transcription factor B subunit1.
    
 0.997
Your Current Organism:
Malassezia restricta
NCBI taxonomy Id: 425264
Other names: M. restricta CBS 7877, Malassezia restricta CBS 7877
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.