STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MGL_3862Uncharacterized protein. (445 aa)    
Predicted Functional Partners:
MGL_3351
3'-5' exonuclease domain-containing protein.
     
 0.557
MGL_4003
DNA polymerase.
   
 0.520
MGL_0483
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.497
MGL_2952
Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.
    
 0.496
MGL_3559
ERCC4 domain-containing protein.
    
 0.486
MGL_2967
Sm domain-containing protein.
    
  0.479
MGL_0418
DNA_pol_E_B domain-containing protein.
    
 0.475
MGL_0419
DNA_pol_D_N domain-containing protein.
    
 0.475
MGL_3315
Small nuclear ribonucleoprotein Sm D2.
    
 0.459
MGL_1795
Uncharacterized protein.
    
  0.451
Your Current Organism:
Malassezia globosa
NCBI taxonomy Id: 425265
Other names: M. globosa CBS 7966, Malassezia globosa CBS 7966
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