Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KGI54650.1Restriction endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. (289 aa)    
Predicted Functional Partners:
KGI54649.1
Restriction endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.817
KGI54639.1
DNA adenine methylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.812
KGI54638.1
DNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.710
KGI54872.1
Copper resistance protein CopD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.546
KGI53619.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.472
KGI54090.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.444
KGI53577.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.419
KGI53712.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.417
KGI53333.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.416
KGI54346.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.414
Your Current Organism:
Helicobacter japonicus
NCBI taxonomy Id: 425400
Other names: ATCC TSD-46, H. japonicus, Helicobacter japonicum, Helicobacter sp. MIT 01-6451, LMG 28612, LMG:28612, strain MIT 01-6451
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.