Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KGI54948.1Cytochrome C peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1021 aa)    
Predicted Functional Partners:
KGI54949.1
Sodium:proton antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.980
KGI54950.1
Cobalt transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.887
KGI54178.1
RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.832
KGI54508.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.777
folP
Dihydropteroate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.609
KGI54953.1
DNA polymerase III subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.600
KGI54954.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.589
KGI54951.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.587
KGI54955.1
Aspartate kinase; Catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aspartokinase family.
       0.568
KGI54509.1
Acriflavin resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  
0.486
Your Current Organism:
Helicobacter japonicus
NCBI taxonomy Id: 425400
Other names: ATCC TSD-46, H. japonicus, Helicobacter japonicum, Helicobacter sp. MIT 01-6451, LMG 28612, LMG:28612, strain MIT 01-6451
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.