STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH88841.1Nucleoid-associated protein. (335 aa)    
Predicted Functional Partners:
SFH88864.1
Polyphosphate:nucleotide phosphotransferase, PPK2 family.
       0.783
SFH88891.1
Putative metallopeptidase.
       0.781
SFH88809.1
TRAP-type uncharacterized transport system, substrate-binding protein.
 
     0.718
SFI01864.1
TIGR01666 family membrane protein.
  
     0.620
SFH90284.1
H-NS family protein MvaT.
  
     0.612
SFI16916.1
Adenylate cyclase.
  
   
 0.607
SFI00256.1
N-acetylglucosaminyl deacetylase, LmbE family.
  
     0.593
SFH77210.1
Outer membrane porin, OprD family.
  
     0.584
SFH83489.1
Hypothetical protein.
  
     0.579
SFH82817.1
Periplasmic chaperone for outer membrane proteins Skp.
  
     0.574
Your Current Organism:
Pseudomonas guineae
NCBI taxonomy Id: 425504
Other names: CECT 7231, LMG 24016, LMG:24016, P. guineae, Pseudomonas guineae Bozal et al. 2007, strain M8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.