Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFH80075.1 | SFH90224.1 | SAMN05216206_0308 | SAMN05216206_0693 | Flagellar protein FlaG. | CBS domain-containing protein. | 0.798 |
SFH90193.1 | SFH90224.1 | SAMN05216206_0692 | SAMN05216206_0693 | Hypothetical protein. | CBS domain-containing protein. | 0.730 |
SFH90193.1 | purU | SAMN05216206_0692 | SAMN05216206_0694 | Hypothetical protein. | Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4). | 0.622 |
SFH90224.1 | SFH80075.1 | SAMN05216206_0693 | SAMN05216206_0308 | CBS domain-containing protein. | Flagellar protein FlaG. | 0.798 |
SFH90224.1 | SFH90193.1 | SAMN05216206_0693 | SAMN05216206_0692 | CBS domain-containing protein. | Hypothetical protein. | 0.730 |
SFH90224.1 | SFI88356.1 | SAMN05216206_0693 | SAMN05216206_3068 | CBS domain-containing protein. | Arabinose-5-phosphate isomerase. | 0.703 |
SFH90224.1 | SFJ05491.1 | SAMN05216206_0693 | SAMN05216206_3402 | CBS domain-containing protein. | CBS domain-containing protein. | 0.731 |
SFH90224.1 | guaA | SAMN05216206_0693 | SAMN05216206_0573 | CBS domain-containing protein. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.868 |
SFH90224.1 | purA | SAMN05216206_0693 | SAMN05216206_0995 | CBS domain-containing protein. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.678 |
SFH90224.1 | purH | SAMN05216206_0693 | SAMN05216206_0959 | CBS domain-containing protein. | IMP cyclohydrolase. | 0.730 |
SFH90224.1 | purU | SAMN05216206_0693 | SAMN05216206_0694 | CBS domain-containing protein. | Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4). | 0.676 |
SFH90224.1 | ribB | SAMN05216206_0693 | SAMN05216206_2937 | CBS domain-containing protein. | GTP cyclohydrolase II /3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.741 |
SFH90224.1 | surE | SAMN05216206_0693 | SAMN05216206_0381 | CBS domain-containing protein. | 5'-nucleotidase /3'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.693 |
SFI88356.1 | SFH90224.1 | SAMN05216206_3068 | SAMN05216206_0693 | Arabinose-5-phosphate isomerase. | CBS domain-containing protein. | 0.703 |
SFI88356.1 | SFJ05491.1 | SAMN05216206_3068 | SAMN05216206_3402 | Arabinose-5-phosphate isomerase. | CBS domain-containing protein. | 0.720 |
SFI88356.1 | guaA | SAMN05216206_3068 | SAMN05216206_0573 | Arabinose-5-phosphate isomerase. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.886 |
SFI88356.1 | purA | SAMN05216206_3068 | SAMN05216206_0995 | Arabinose-5-phosphate isomerase. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.579 |
SFI88356.1 | purH | SAMN05216206_3068 | SAMN05216206_0959 | Arabinose-5-phosphate isomerase. | IMP cyclohydrolase. | 0.600 |
SFI88356.1 | ribB | SAMN05216206_3068 | SAMN05216206_2937 | Arabinose-5-phosphate isomerase. | GTP cyclohydrolase II /3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.479 |
SFJ05491.1 | SFH90224.1 | SAMN05216206_3402 | SAMN05216206_0693 | CBS domain-containing protein. | CBS domain-containing protein. | 0.731 |
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