STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH92045.1Putative iron-regulated protein. (444 aa)    
Predicted Functional Partners:
SFH92072.1
CxxC motif-containing protein, DUF1111 family.
 
    0.970
SFH92094.1
Hypothetical protein.
 
  
 0.934
SFH92119.1
Hypothetical protein.
 
    0.881
SFI04831.1
iron(III) transport system substrate-binding protein.
  
    0.877
SFH80482.1
Bacterioferritin-associated ferredoxin.
  
  
 0.790
SFH92015.1
LemA protein.
       0.534
SFH91993.1
E3 Ubiquitin ligase.
       0.510
SFI05368.1
Hypothetical protein; Manually curated.
  
     0.456
SFH87224.1
Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA).
 
     0.444
SFI04810.1
iron(III) transport system permease protein.
 
    0.400
Your Current Organism:
Pseudomonas guineae
NCBI taxonomy Id: 425504
Other names: CECT 7231, LMG 24016, LMG:24016, P. guineae, Pseudomonas guineae Bozal et al. 2007, strain M8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.