STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH94179.1Cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. (302 aa)    
Predicted Functional Partners:
SFH94149.1
Hypothetical protein.
     
 0.664
SFH80333.1
Flagellar basal-body rod protein FlgG; Belongs to the flagella basal body rod proteins family.
    
 
 0.642
SFI89624.1
Cu+-exporting ATPase.
  
 
 0.601
SFI18629.1
High-affinity iron transporter.
     
 0.533
SFH89275.1
Cation diffusion facilitator family transporter.
  
 
 0.487
SFH94119.1
ATP-dependent helicase HrpB.
  
   0.479
SFI58013.1
Cu+-exporting ATPase.
  
 
 0.419
SFH94210.1
Transcriptional regulator, AsnC family.
       0.404
Your Current Organism:
Pseudomonas guineae
NCBI taxonomy Id: 425504
Other names: CECT 7231, LMG 24016, LMG:24016, P. guineae, Pseudomonas guineae Bozal et al. 2007, strain M8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.