Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFH97954.1 | SFI02555.1 | SAMN05216206_0956 | SAMN05216206_1139 | MJ0042 family finger-like domain-containing protein. | Chemosensory pili system protein ChpC. | 0.704 |
SFH97954.1 | SFI02597.1 | SAMN05216206_0956 | SAMN05216206_1141 | MJ0042 family finger-like domain-containing protein. | Chemosensory pili system protein ChpA (sensor histidine kinase/response regulator). | 0.696 |
SFH97954.1 | SFI02748.1 | SAMN05216206_0956 | SAMN05216206_1148 | MJ0042 family finger-like domain-containing protein. | Protein TonB. | 0.754 |
SFH97954.1 | SFI08157.1 | SAMN05216206_0956 | SAMN05216206_1359 | MJ0042 family finger-like domain-containing protein. | HD-like signal output (HDOD) domain, no enzymatic activity. | 0.688 |
SFH97954.1 | SFI17963.1 | SAMN05216206_0956 | SAMN05216206_1766 | MJ0042 family finger-like domain-containing protein. | Hypothetical protein. | 0.652 |
SFH97954.1 | SFI36536.1 | SAMN05216206_0956 | SAMN05216206_2022 | MJ0042 family finger-like domain-containing protein. | Hypothetical protein. | 0.756 |
SFH97954.1 | SFI72972.1 | SAMN05216206_0956 | SAMN05216206_2856 | MJ0042 family finger-like domain-containing protein. | Pilus assembly protein FimV. | 0.682 |
SFH97954.1 | SFI81776.1 | SAMN05216206_0956 | SAMN05216206_2879 | MJ0042 family finger-like domain-containing protein. | Hypothetical protein. | 0.772 |
SFH97954.1 | SFJ20640.1 | SAMN05216206_0956 | SAMN05216206_3690 | MJ0042 family finger-like domain-containing protein. | Hypothetical protein. | 0.614 |
SFH97954.1 | prmA | SAMN05216206_0956 | SAMN05216206_0955 | MJ0042 family finger-like domain-containing protein. | [LSU ribosomal protein L11P]-lysine N-methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family. | 0.638 |
SFI02555.1 | SFH97954.1 | SAMN05216206_1139 | SAMN05216206_0956 | Chemosensory pili system protein ChpC. | MJ0042 family finger-like domain-containing protein. | 0.704 |
SFI02555.1 | SFI02597.1 | SAMN05216206_1139 | SAMN05216206_1141 | Chemosensory pili system protein ChpC. | Chemosensory pili system protein ChpA (sensor histidine kinase/response regulator). | 0.977 |
SFI02555.1 | SFI02748.1 | SAMN05216206_1139 | SAMN05216206_1148 | Chemosensory pili system protein ChpC. | Protein TonB. | 0.581 |
SFI02555.1 | SFI36536.1 | SAMN05216206_1139 | SAMN05216206_2022 | Chemosensory pili system protein ChpC. | Hypothetical protein. | 0.783 |
SFI02555.1 | SFI72972.1 | SAMN05216206_1139 | SAMN05216206_2856 | Chemosensory pili system protein ChpC. | Pilus assembly protein FimV. | 0.643 |
SFI02555.1 | SFI81776.1 | SAMN05216206_1139 | SAMN05216206_2879 | Chemosensory pili system protein ChpC. | Hypothetical protein. | 0.755 |
SFI02555.1 | SFJ20640.1 | SAMN05216206_1139 | SAMN05216206_3690 | Chemosensory pili system protein ChpC. | Hypothetical protein. | 0.751 |
SFI02597.1 | SFH97954.1 | SAMN05216206_1141 | SAMN05216206_0956 | Chemosensory pili system protein ChpA (sensor histidine kinase/response regulator). | MJ0042 family finger-like domain-containing protein. | 0.696 |
SFI02597.1 | SFI02555.1 | SAMN05216206_1141 | SAMN05216206_1139 | Chemosensory pili system protein ChpA (sensor histidine kinase/response regulator). | Chemosensory pili system protein ChpC. | 0.977 |
SFI02597.1 | SFI02748.1 | SAMN05216206_1141 | SAMN05216206_1148 | Chemosensory pili system protein ChpA (sensor histidine kinase/response regulator). | Protein TonB. | 0.755 |
page 1 of 4