STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFI00147.1Glycerol-3-phosphate dehydrogenase. (390 aa)    
Predicted Functional Partners:
SFI00175.1
Predicted oxidoreductase.
 
  
 0.959
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
  
 
 0.838
SFI92360.1
D-lactate dehydrogenase.
  
 
 0.831
SFI13301.1
SMI1-KNR4 cell-wall.
  
     0.709
SFI55975.1
Protein of unknown function.
  
     0.683
SFI88965.1
Hypothetical protein.
  
     0.671
SFI00123.1
Small multidrug resistance pump.
       0.654
SFI00256.1
N-acetylglucosaminyl deacetylase, LmbE family.
  
     0.653
SFH73093.1
Uncharacterized membrane protein.
  
     0.648
SFI00203.1
Hypothetical protein.
       0.640
Your Current Organism:
Pseudomonas guineae
NCBI taxonomy Id: 425504
Other names: CECT 7231, LMG 24016, LMG:24016, P. guineae, Pseudomonas guineae Bozal et al. 2007, strain M8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.